STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000041650Uncharacterized protein. (289 aa)    
Predicted Functional Partners:
ENSORLP00000035157
Uncharacterized protein.
 
 
  0.939
ENSORLP00000027500
Uncharacterized protein.
 
     0.932
ENSORLP00000030974
Uncharacterized protein.
 
     0.921
ENSORLP00000032321
Uncharacterized protein.
 
     0.919
ENSORLP00000041646
Uncharacterized protein.
 
     0.919
ENSORLP00000031355
Uncharacterized protein.
 
     0.918
ENSORLP00000038732
Uncharacterized protein.
 
     0.918
ENSORLP00000033786
Uncharacterized protein.
 
     0.917
ENSORLP00000042107
Uncharacterized protein.
 
     0.917
ENSORLP00000037047
Uncharacterized protein.
 
     0.916
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.