STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101168591Zinc finger, FYVE domain containing 1. (780 aa)    
Predicted Functional Partners:
H2M6E4_ORYLA
Uncharacterized protein.
    
 0.958
LOC101165932
Intersectin 2a.
    
 0.958
ENSORLP00000034742
Uncharacterized protein.
    
 0.958
ENSORLP00000036645
EH domain-containing protein.
    
 0.958
ENSORLP00000041578
SH3 domain-containing protein.
    
 0.958
ZFYVE1
Zinc finger FYVE-type containing 1.
  
  
 
0.901
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 0.836
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 0.836
rps27a
Ribosomal protein S27a.
    
 0.810
ENSORLP00000038626
Ldh_1_N domain-containing protein.
    
 0.806
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.