STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101174037Far upstream element (FUSE) binding protein 3. (576 aa)    
Predicted Functional Partners:
PUF60
Poly-U binding splicing factor b.
   
 
 0.612
LOC101171279
Uncharacterized protein.
   
 
 0.612
ENSORLP00000029956
Uncharacterized protein.
   
 0.547
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.495
exosc2
Exosome component 2.
   
  0.475
LOC101158568
QKI, KH domain containing, RNA binding a.
   
 
 0.468
LOC101161529
QKI, KH domain containing, RNA binding 2.
   
 
 0.468
toe1
Target of EGR1, exonuclease.
   
 0.451
exosc3
Exosome component 3.
   
 
 0.435
exosc5
Exosome component 5.
   
 
 0.434
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.