STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fkbp3Peptidylprolyl isomerase. (220 aa)    
Predicted Functional Partners:
H2L4B7_ORYLA
Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.768
Mtor
Serine/threonine-protein kinase TOR.
    
 
 0.768
ppp3r1
Uncharacterized protein.
   
 0.687
LOC101168674
Uncharacterized protein.
   
 0.687
calm3
Calmodulin-A; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.
   
 0.673
LOC100049422
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.673
LOC100049419
Calmodulin.
   
 0.673
calm2
Calmodulin 2.
   
 0.673
rptor
Regulatory associated protein of MTOR, complex 1.
    
 
 0.666
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.659
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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