STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101163582Uncharacterized protein. (545 aa)    
Predicted Functional Partners:
LOC101174862
Fizzy/cell division cycle 20 related 1b.
   
 0.920
FZR1
Fizzy/cell division cycle 20 related 1a.
   
 0.920
cdc14a
Cell division cycle 14Ab.
  
  
 
0.907
ipo5
Karyopherin (importin) beta 3.
   
 
 0.827
stk38l
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 
 0.789
stk38
Serine/threonine kinase 38a; Belongs to the protein kinase superfamily.
   
 
 0.789
plk2
Serine/threonine-protein kinase PLK.
   
 
 0.782
plk3
Serine/threonine-protein kinase PLK.
   
 
 0.782
PLK1
Serine/threonine-protein kinase PLK.
   
 
 0.782
wee1
Wee1-like protein kinase.
   
 
 0.766
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.