STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Wdr3Uncharacterized protein. (80 aa)    
Predicted Functional Partners:
utp18
WD_REPEATS_REGION domain-containing protein.
   
 0.996
LOC101167684
PWP2 small subunit processome component.
   
 0.994
tefm
UTP6 small subunit processome component.
   
 0.994
wdr36
WD repeat domain 36.
   
 0.994
tbl3
Transducin (beta)-like 3.
   
 0.994
wdr75
WD repeat domain 75.
   
 0.991
wdr43
WD repeat domain 43.
   
 0.989
utp4
UTP4 small subunit processome component.
   
 0.988
utp15
UTP15 small subunit processome component.
   
 0.987
nol6
Nucleolar protein 6.
   
 0.981
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.