STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ncaph2Non-SMC condensin II complex, subunit H2. (610 aa)    
Predicted Functional Partners:
ncapg2
Non-SMC condensin II complex, subunit G2.
   
 0.997
ncapd3
Non-SMC condensin II complex, subunit D3.
   
 0.994
smc2
Structural maintenance of chromosomes protein.
   
 0.994
smc4
Structural maintenance of chromosomes protein.
   
 0.984
ncaph
Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.
   
 
 0.836
smc3
Structural maintenance of chromosomes protein.
   
 0.816
smc1b
Structural maintenance of chromosomes protein.
   
 0.807
smc1a
Structural maintenance of chromosomes protein.
   
 0.807
smc5
Structural maintenance of chromosomes 5.
   
 0.800
ncapg
Non-SMC condensin I complex, subunit G.
   
 0.799
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.