STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mertkC-mer proto-oncogene tyrosine kinase a. (933 aa)    
Predicted Functional Partners:
pros1
Protein S.
     
 0.840
LOC101167491
Neurexin 1.
      
 0.678
gas6
Growth arrest-specific 6.
    
 0.645
tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1.
  
 0.634
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.629
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.624
sft2d1
Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.
      
 0.619
thbs2
Thrombospondin 2a.
    
 0.602
erlec1
Endoplasmic reticulum lectin 1.
   
 0.598
psme4
Proteasome activator subunit 4a.
     
 0.581
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.