STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000042816Uncharacterized protein. (393 aa)    
Predicted Functional Partners:
Wdr90
WD_REPEATS_REGION domain-containing protein.
 
 
 
 0.960
pacrg
PARK2 co-regulated.
    
 
 0.910
efhc1
EF-hand domain (C-terminal) containing 1.
    
 
 0.872
efhc2
EF-hand domain (C-terminal) containing 2.
    
 
 0.872
efhb
Uncharacterized protein.
    
   0.865
HGFAC
HGF activator.
   
 0.852
habp2
Uncharacterized protein.
   
 0.852
ripk4
Receptor-interacting serine-threonine kinase 4.
   
 0.832
spag8
Sperm associated antigen 8.
    
   0.830
ENSORLP00000041141
Uncharacterized protein.
    
   0.830
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.