ccdc69 protein (Oryzias latipes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ccdc69

Uncharacterized protein. (300 aa)

Predicted Functional Partners:

LOC101159060

0.558

H2MFT0_ORYLA

0.463

srd5a3

0.453

rmi2

0.410

etaa1

0.409

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2MFT0_ORYLA	ccdc69	ENSORLP00000017457	ENSORLP00000042826	zf_C2H2_ZHX domain-containing protein.	Uncharacterized protein.	0.463
LOC101159060	ccdc69	ENSORLP00000016479	ENSORLP00000042826	Leucine rich repeat containing 17.	Uncharacterized protein.	0.558
ccdc69	H2MFT0_ORYLA	ENSORLP00000042826	ENSORLP00000017457	Uncharacterized protein.	zf_C2H2_ZHX domain-containing protein.	0.463
ccdc69	LOC101159060	ENSORLP00000042826	ENSORLP00000016479	Uncharacterized protein.	Leucine rich repeat containing 17.	0.558
ccdc69	etaa1	ENSORLP00000042826	ENSORLP00000027370	Uncharacterized protein.	Uncharacterized protein.	0.409
ccdc69	rmi2	ENSORLP00000042826	ENSORLP00000006136	Uncharacterized protein.	RecQ mediated genome instability 2.	0.410
ccdc69	srd5a3	ENSORLP00000042826	ENSORLP00000000749	Uncharacterized protein.	Steroid 5 alpha-reductase 3.	0.453
etaa1	ccdc69	ENSORLP00000027370	ENSORLP00000042826	Uncharacterized protein.	Uncharacterized protein.	0.409
rmi2	ccdc69	ENSORLP00000006136	ENSORLP00000042826	RecQ mediated genome instability 2.	Uncharacterized protein.	0.410
srd5a3	ccdc69	ENSORLP00000000749	ENSORLP00000042826	Steroid 5 alpha-reductase 3.	Uncharacterized protein.	0.453