STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101163673Occludin a. (497 aa)    
Predicted Functional Partners:
LOC101160233
Tight junction protein 1b; Belongs to the MAGUK family.
   
 0.981
LOC101166369
Tight junction protein 1a; Belongs to the MAGUK family.
   
 0.981
ocln
Occludin b.
  
 
 
0.925
SRC
Tyrosine-protein kinase.
   
 0.912
LOC101163521
Zgc:154006.
  
  
 
0.912
LOC101164480
Tyrosine-protein kinase.
   
 0.912
pard3
Par-3 family cell polarity regulator alpha, b.
    
 0.910
PARD3
Par-3 family cell polarity regulator.
    
 0.910
LOC101169436
Occludin; May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier. Belongs to the ELL/occludin family.
  
  
 
0.906
tjp2
Tight junction protein 2a (zona occludens 2); Belongs to the MAGUK family.
   
 
 0.817
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.