STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101155470Uncharacterized protein. (210 aa)    
Predicted Functional Partners:
am4
Adrenomedullin 4.
    
 0.991
adm
Uncharacterized protein.
    
 0.991
calcrl
Calcitonin receptor-like a; Belongs to the G-protein coupled receptor 2 family.
    
 0.990
LOC101172311
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
 0.985
LOC101159437
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
 0.985
LOC101156047
Uncharacterized protein.
   
 
0.973
ramp1
Receptor activity modifying protein 1.
     
0.951
LOC101165131
Uncharacterized protein.
     
0.951
GNAS
Uncharacterized protein.
    
 0.948
LOC101166373
GNAS complex locus.
    
 0.948
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.