STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100301626Fork-head domain-containing protein. (355 aa)    
Predicted Functional Partners:
zar1
Zygote arrest 1.
      
 0.672
trrap
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.571
mrgbp
MRG/MORF4L binding protein.
    
   0.562
meaf6
MYST/Esa1-associated factor 6.
    
   0.561
yeats4
YEATS domain containing 4.
    
   0.560
gripap1
GRIP1 associated protein 1.
      
 0.558
ing3
Inhibitor of growth protein.
   
   0.558
dmap1
DNA methyltransferase 1 associated protein 1.
    
   0.551
vps72
Vacuolar protein sorting 72 homolog a.
   
   0.548
ENSORLP00000028345
Bromo domain-containing protein.
    
  0.454
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.