STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
txndc12Thioredoxin domain containing 12 (endoplasmic reticulum). (191 aa)    
Predicted Functional Partners:
LOC101173412
Thioredoxin domain-containing protein.
   
 0.921
LOC101174176
Peroxiredoxin 6.
   
 0.921
gsta4
Uncharacterized protein; Belongs to the GST superfamily.
   
 0.916
mgst3
Uncharacterized protein.
    
  0.907
LOC101161354
Microsomal glutathione S-transferase 3b.
    
  0.907
LOC101171103
Uncharacterized protein; Belongs to the GST superfamily.
     
 0.902
LOC101168556
Uncharacterized protein; Belongs to the GST superfamily.
    
  0.902
LOC101170897
Glutathione S-transferase theta 2; Belongs to the GST superfamily.
    
  0.902
LOC101167553
Glutathione S-transferase rho; Belongs to the GST superfamily.
    
  0.902
LOC101173040
Glutathione S-transferase theta 1a; Belongs to the GST superfamily.
    
  0.902
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.