STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101155537Si:ch73-105b23.6. (636 aa)    
Predicted Functional Partners:
scaf1
SR-related CTD-associated factor 1.
  
     0.469
baiap2l2
BAI1-associated protein 2-like 2b.
  
    0.442
LOC101164674
Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, b.
  
     0.442
LOC101166591
Si:ch211-218d20.15.
  
     0.437
LOC101167150
Si:ch73-382f3.1.
  
   
 0.433
ENSORLP00000032430
Uncharacterized protein.
 
   
  0.417
susd1
Sushi domain containing 1.
     
 0.405
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.