STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
peloProtein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (385 aa)    
Predicted Functional Partners:
hbs1l
HBS1-like translational GTPase.
   
 
 0.994
fau
40S ribosomal protein S30.
    
 
 0.992
abce1
ATP-binding cassette, sub-family E (OABP), member 1.
  
 
 0.951
rack1
Receptor for activated C kinase 1.
    
 
 0.933
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.900
rps6
Ribosomal protein S6.
    
 
 0.900
rps10
Ribosomal protein S10.
    
 
 0.886
wdr31
WD repeat domain 31.
    
 
 0.885
rps12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 
 0.874
RPL7A
Ribosomal protein L7a.
   
 
 0.871
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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