STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101168539Prickle homolog 2a. (968 aa)    
Predicted Functional Partners:
VANGL2
Vang-like protein.
    
 0.982
VANGL1
VANGL planar cell polarity protein 1.
    
 0.982
dvl2
Dishevelled segment polarity protein 2.
    
 0.970
dvl3
Dishevelled segment polarity protein 3a.
    
 0.963
LOC101170632
Vang-like protein.
    
 0.963
dvl1
Dishevelled segment polarity protein 1a.
    
 0.963
daam1
Dishevelled associated activator of morphogenesis 1b.
    
 0.699
celsr1
Cadherin EGF LAG seven-pass G-type receptor 1a; Belongs to the G-protein coupled receptor 2 family.
   
 0.653
invs
Inversin.
   
 0.648
nap1l1
Nucleosome assembly protein 1-like 1; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.587
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.