STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000043638Uncharacterized protein. (1238 aa)    
Predicted Functional Partners:
ENSORLP00000034783
Uncharacterized protein.
 
    
 0.905
LOC101160614
Regulator of G protein signaling 6.
   
 
 0.493
rgs7
Regulator of G protein signaling 7a.
   
 
 0.493
LOC101168163
Uncharacterized protein.
   
 
 0.493
gnb5
Guanine nucleotide binding protein (G protein), beta 5a.
    
 0.492
LOC101156727
Guanine nucleotide binding protein (G protein), beta 5b.
    
 0.492
rgs11
Regulator of G protein signaling 11.
   
 
 0.451
LOC101159509
Regulator of G protein signaling 9a.
   
 
 0.451
rgs9
Regulator of G protein signaling 9b.
   
 
 0.451
LOC101161179
Zinc finger protein 296.
  
     0.443
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.