STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101158978Mitogen-activated protein kinase. (422 aa)    
Predicted Functional Partners:
LOC101157952
Mitogen-activated protein kinase.
  
 
0.923
map2k7
Mitogen-activated protein kinase kinase 7.
   
0.883
LOC101161098
Mitogen-activated protein kinase kinase 4b; Belongs to the protein kinase superfamily.
  
0.877
LOC101160956
JunE proto-oncogene, AP-1 transcription factor subunit.
    
 0.876
ENSORLP00000032968
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
    
 0.876
map2k4
Mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily.
   
0.867
ENSORLP00000029432
Mitochondrial ribosomal protein S5.
   
 
 0.758
mrps12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.756
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.739
mrpl41
Uncharacterized protein.
   
 
 0.736
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.