STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101174831Troponin C type 1a (slow). (161 aa)    
Predicted Functional Partners:
LOC105354378
Troponin T type 2a (cardiac).
   
 0.964
LOC101158987
Uncharacterized protein.
   
 0.962
LOC101156569
Troponin I type 1b (skeletal, slow).
   
 0.927
H2LWG8_ORYLA
Troponin I type 1a (skeletal, slow).
   
 0.927
LOC101171215
Troponin C type 1b (slow).
  
  
 
0.900
LOC101155425
Troponin I type 2a (skeletal, fast), tandem duplicate 1.
   
 0.883
TNNI2
Troponin I2, fast skeletal type.
   
 0.883
LOC101155923
Uncharacterized protein.
   
 0.883
LOC101172654
Uncharacterized protein.
   
 0.861
LOC101161235
Troponin I4b, tandem duplicate 2.
   
 0.861
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.