STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000044201Uncharacterized protein. (114 aa)    
Predicted Functional Partners:
shisa9
Shisa family member 9a.
  
  
0.598
LOC101169874
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
 
  0.557
LOC101175170
Uncharacterized protein.
   
 
  0.557
LOC101157296
Shisa family member 9b.
  
  
 
0.557
shisa8
Uncharacterized protein.
  
  
 
0.545
LOC101163260
Calcium channel, voltage-dependent, gamma subunit 8a.
     
 0.543
LOC101165174
Calcium channel, voltage-dependent, gamma subunit 8b.
     
 0.543
grin2c
Glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca.
     
  0.540
SHISA6
Shisa family member 6.
     
 
0.540
LOC101156644
Si:dkey-183j2.10; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
     
  0.540
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.