STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101171200Embryonal Fyn-associated substrate. (943 aa)    
Predicted Functional Partners:
crk
CRK proto-oncogene, adaptor protein.
    
 0.686
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.686
LOC110016423
Uncharacterized protein.
    
 0.686
actl6a
Actin-like 6A; Belongs to the actin family.
    
 0.684
dctn2
Dynactin 2 (p50).
   
 0.683
arpc3
Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
 0.671
H2M6E4_ORYLA
Uncharacterized protein.
     
 0.671
LOC101165932
Intersectin 2a.
     
 0.671
ENSORLP00000034742
Uncharacterized protein.
     
 0.671
ENSORLP00000036645
EH domain-containing protein.
     
 0.671
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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