STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHNAKAHNAK nucleoprotein. (6055 aa)    
Predicted Functional Partners:
LOC101155699
Protein S100; Belongs to the S-100 family.
   
 0.973
anxa2
Annexin.
   
 0.962
LOC101167451
Annexin.
   
 0.961
LOC101168473
Annexin.
   
 0.945
LOC101155878
Protein S100; Belongs to the S-100 family.
   
  0.910
rhbdd1
Rhomboid domain containing 1.
    
 
 0.823
agfg1
ArfGAP with FG repeats 1a.
      
 0.813
sae1
SUMO1 activating enzyme subunit 1.
    
 0.630
MSL3
MSL complex subunit 3.
    
 0.614
ccnd1
Cyclin D1; Belongs to the cyclin family.
   
 0.553
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.