STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000044450Myosin VB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (614 aa)    
Predicted Functional Partners:
myo5a
Myosin VAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
 
    
 0.940
ENSORLP00000031955
Uncharacterized protein.
 
  
 0.903
Myo5b
Myosin VB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
 
      0.899
RAB11A
RAB11A, member RAS oncogene family.
   
 0.892
H2M010_ORYLA
Uncharacterized protein.
 
  
 0.874
MYH6
Myosin_tail_1 domain-containing protein.
 
 
 0.753
H2L4B8_ORYLA
Myosin_tail_1 domain-containing protein.
 
 
 0.712
SPIRE1
Spire type actin nucleation factor 1.
   
 0.683
H2MD12_ORYLA
Myosin_tail_1 domain-containing protein.
 
 
 0.679
LOC101164834
FH2 domain-containing protein.
    
 
 0.640
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.