STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kansl1lPEHE domain-containing protein. (847 aa)    
Predicted Functional Partners:
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.978
kansl3
KAT8 regulatory NSL complex subunit 3.
    
 0.963
mcrs1
Microspherule protein 1.
    
 0.941
ENSORLP00000027929
Uncharacterized protein.
    
 0.888
phf20
PHD finger protein 20, a.
    
 0.888
wdr5
WD repeat domain 5.
    
 0.858
kat8
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.846
wsb2
WD repeat and SOCS box containing 2.
    
 0.790
wsb1
WD repeat and SOCS box containing 1.
    
 0.790
kat5
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.763
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.