Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101161022 | LOC101172966 | ENSORLP00000012538 | ENSORLP00000000116 | Uncharacterized protein. | Syntaxin 6; Belongs to the syntaxin family. | 0.915 |
LOC101161022 | napa | ENSORLP00000012538 | ENSORLP00000002737 | Uncharacterized protein. | N-ethylmaleimide-sensitive factor attachment protein, alpha b. | 0.589 |
LOC101161022 | stx10 | ENSORLP00000012538 | ENSORLP00000024914 | Uncharacterized protein. | Syntaxin 10. | 0.915 |
LOC101161022 | stx16 | ENSORLP00000012538 | ENSORLP00000044487 | Uncharacterized protein. | Syntaxin 16; Belongs to the syntaxin family. | 0.965 |
LOC101161022 | stx8 | ENSORLP00000012538 | ENSORLP00000030397 | Uncharacterized protein. | Syntaxin 8. | 0.913 |
LOC101161022 | vamp4 | ENSORLP00000012538 | ENSORLP00000002367 | Uncharacterized protein. | Vesicle-associated membrane protein 4. | 0.911 |
LOC101161022 | vps45 | ENSORLP00000012538 | ENSORLP00000001726 | Uncharacterized protein. | Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family. | 0.636 |
LOC101161022 | vti1a | ENSORLP00000012538 | ENSORLP00000041478 | Uncharacterized protein. | Vesicle transport through interaction with t-SNAREs 1A. | 0.977 |
LOC101161022 | vti1b | ENSORLP00000012538 | ENSORLP00000041985 | Uncharacterized protein. | Vesicle transport through interaction with t-SNAREs 1B. | 0.945 |
LOC101161022 | ykt6 | ENSORLP00000012538 | ENSORLP00000032864 | Uncharacterized protein. | YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family. | 0.916 |
LOC101172966 | LOC101161022 | ENSORLP00000000116 | ENSORLP00000012538 | Syntaxin 6; Belongs to the syntaxin family. | Uncharacterized protein. | 0.915 |
LOC101172966 | napa | ENSORLP00000000116 | ENSORLP00000002737 | Syntaxin 6; Belongs to the syntaxin family. | N-ethylmaleimide-sensitive factor attachment protein, alpha b. | 0.915 |
LOC101172966 | stx10 | ENSORLP00000000116 | ENSORLP00000024914 | Syntaxin 6; Belongs to the syntaxin family. | Syntaxin 10. | 0.552 |
LOC101172966 | stx16 | ENSORLP00000000116 | ENSORLP00000044487 | Syntaxin 6; Belongs to the syntaxin family. | Syntaxin 16; Belongs to the syntaxin family. | 0.980 |
LOC101172966 | stx8 | ENSORLP00000000116 | ENSORLP00000030397 | Syntaxin 6; Belongs to the syntaxin family. | Syntaxin 8. | 0.892 |
LOC101172966 | vamp4 | ENSORLP00000000116 | ENSORLP00000002367 | Syntaxin 6; Belongs to the syntaxin family. | Vesicle-associated membrane protein 4. | 0.992 |
LOC101172966 | vps45 | ENSORLP00000000116 | ENSORLP00000001726 | Syntaxin 6; Belongs to the syntaxin family. | Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family. | 0.902 |
LOC101172966 | vti1a | ENSORLP00000000116 | ENSORLP00000041478 | Syntaxin 6; Belongs to the syntaxin family. | Vesicle transport through interaction with t-SNAREs 1A. | 0.992 |
LOC101172966 | vti1b | ENSORLP00000000116 | ENSORLP00000041985 | Syntaxin 6; Belongs to the syntaxin family. | Vesicle transport through interaction with t-SNAREs 1B. | 0.960 |
LOC101172966 | ykt6 | ENSORLP00000000116 | ENSORLP00000032864 | Syntaxin 6; Belongs to the syntaxin family. | YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family. | 0.925 |
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