STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101175626Uncharacterized protein. (372 aa)    
Predicted Functional Partners:
arhgef1
Rho guanine nucleotide exchange factor (GEF) 1b.
    
 0.973
arhgef12
Rho guanine nucleotide exchange factor (GEF) 12a.
    
 0.973
LOC101167634
Coagulation factor II thrombin receptor.
    
 0.932
ednra
Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.
    
 0.925
LOC101172686
Endothelin receptor type Ab; Belongs to the G-protein coupled receptor 1 family.
    
 0.925
LOC101160103
Chemokine (C-X-C motif) receptor 4a; Belongs to the G-protein coupled receptor 1 family.
    
 0.923
LOC100049444
C-X-C motif chemokine receptor 4; Belongs to the G-protein coupled receptor 1 family.
    
 0.923
Agtr1
Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family.
    
 0.920
H2M1G9_ORYLA
Coagulation factor II (thrombin) receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.915
v1ar2
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
  0.914
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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