STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc66a3Solute carrier family 66 member 3. (205 aa)    
Predicted Functional Partners:
Kcnf1
Potassium voltage-gated channel, subfamily F, member 1a; Belongs to the potassium channel family.
      
 0.613
nol10
Nucleolar protein 10.
      
 0.559
yipf4
Protein YIPF.
      
 0.558
dolpp1
Dolichyldiphosphatase 1.
   
  
 0.512
oxa1l
OXA1L mitochondrial inner membrane protein.
      
 0.487
H2MUP9_ORYLA
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.450
tmem41a
Transmembrane protein 41aa.
   
  
 0.446
LOC101174769
Transmembrane protein 41ab.
   
  
 0.446
pdia6
Protein disulfide isomerase family A, member 6; Belongs to the protein disulfide isomerase family.
      
 0.400
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.