STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000044551Uncharacterized protein. (201 aa)    
Predicted Functional Partners:
ENSORLP00000044816
Ig-like domain-containing protein.
 
    0.950
ENSORLP00000027531
Uncharacterized protein.
 
     0.946
ENSORLP00000040171
Uncharacterized protein.
 
     0.935
ENSORLP00000037886
Uncharacterized protein.
 
    
0.905
ENSORLP00000027319
Uncharacterized protein.
 
     
0.900
ENSORLP00000027500
Uncharacterized protein.
 
      0.900
ENSORLP00000038732
Uncharacterized protein.
 
      0.900
ENSORLP00000041646
Uncharacterized protein.
 
      0.900
ENSORLP00000042987
Uncharacterized protein.
 
     
0.900
ENSORLP00000028632
Uncharacterized protein.
 
      0.899
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.