STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rd3lUncharacterized protein. (222 aa)    
Predicted Functional Partners:
dexi
Dexi homolog (mouse).
      
 0.630
GPR139
G protein-coupled receptor 139.
      
 0.560
rfxap
Regulatory factor X-associated protein.
      
 0.558
ENSORLP00000035296
Basic helix-loop-helix family, member a9.
      
 0.558
tmem121
Transmembrane protein 121Ab.
      
 0.509
LOC101167896
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.445
rrh
Retinal pigment epithelium-derived rhodopsin homolog; Belongs to the G-protein coupled receptor 1 family.
      
 0.445
LOC101168154
MAP6 domain containing 1.
      
 0.400
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.