STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101173774Uncharacterized protein. (565 aa)    
Predicted Functional Partners:
etfb
Electron transfer flavoprotein subunit beta.
     
 0.589
vcp
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.578
spata5l1
Spermatogenesis associated 5-like 1.
   
 0.574
eef2kmt
Eukaryotic elongation factor 2 lysine methyltransferase.
   
 
 0.570
mettl27
Methyltransferase like 27.
   
  
 0.566
mettl9
Methyltransferase like 9.
      
 0.558
mettl5
Methyltransferase like 5.
      
 0.558
ntmt1
N-terminal Xaa-Pro-Lys N-methyltransferase 1.
   
  
 0.502
etfbkmt
Electron transfer flavoprotein subunit beta lysine methyltransferase.
      
 0.451
mettl1
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
  
 0.436
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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