STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tankTRAF family member-associated NFKB activator. (345 aa)    
Predicted Functional Partners:
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.995
tradd
Tnfrsf1a-associated via death domain.
     
 0.965
tbk1
TANK-binding kinase 1.
   
 0.965
traf3
TNF receptor-associated factor.
    
 0.952
ikbkg
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
   
 0.948
tnfrsf1a
Tumor necrosis factor receptor superfamily, member 1a.
   
 
 0.925
LOC101172593
Tumor necrosis factor a (TNF superfamily, member 2).
    
 
 0.916
LOC101165127
UDENN FLCN/SMCR8-type domain-containing protein.
     
 0.911
smcr8
Smith-Magenis syndrome chromosome region, candidate 8a.
     
 0.911
azi2
5-azacytidine induced 2.
   
 
 0.908
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.