STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000045042Uncharacterized protein. (90 aa)    
Predicted Functional Partners:
LOC101175393
Macrophage stimulating 1 receptor a.
   
  0.602
met
MET proto-oncogene, receptor tyrosine kinase.
   
  0.602
mst1r
Macrophage stimulating 1 receptor b.
   
  0.602
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
    
 0.415
LOC101175325
Uncharacterized protein.
    
 0.415
LOC101163690
Synaptic Ras GTPase activating protein 1b.
    
 0.415
rasal2
RAS protein activator like 2.
    
 0.415
LOC101156944
RAS protein activator like 3.
    
 0.415
LOC101160492
Uncharacterized protein.
    
 0.415
dab2ip
DAB2 interacting protein b.
    
 0.415
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.