STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem189Si:ch211-212o1.2. (283 aa)    
Predicted Functional Partners:
ENSORLP00000026261
UBIQUITIN_CONJUGAT_2 domain-containing protein.
 
  
  0.940
selenoi
Selenoprotein I; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.904
LOC101162058
Phospholipase D family, member 3.
     
  0.900
LOC101155216
Phospholipase.
     
  0.900
PLD4
Phospholipase D family member 4.
     
  0.900
pld1
Phospholipase.
     
  0.900
LOC101175514
Phospholipase.
     
  0.900
LOC101159515
Phospholipase D family, member 7.
     
  0.900
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.712
H2M970_ORYLA
Ubiquitin-like domain-containing protein.
    
 0.712
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.