STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000045097Integrase catalytic domain-containing protein. (399 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
    
 0.634
ENSORLP00000042198
Reverse transcriptase domain-containing protein.
 
     0.545
ENSORLP00000032678
Reverse transcriptase domain-containing protein.
 
     0.539
ENSORLP00000031446
Reverse transcriptase domain-containing protein.
 
     0.533
LOC101156138
Reverse transcriptase domain-containing protein.
 
     0.477
ENSORLP00000039045
Uncharacterized protein.
 
     0.457
ENSORLP00000034574
Reverse transcriptase domain-containing protein.
 
     0.436
ENSORLP00000028842
Reverse transcriptase domain-containing protein.
 
     0.424
ENSORLP00000037614
Reverse transcriptase domain-containing protein.
 
     0.415
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.