STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etv1Ets variant 1. (438 aa)    
Predicted Functional Partners:
cop1
COP1 E3 ubiquitin ligase.
    
 
 0.735
stk40
Serine/threonine kinase 40.
   
   0.678
det1
DET1 partner of COP1 E3 ubiquitin ligase.
    
 
 0.645
ewsr1
EWS RNA-binding protein 1b.
   
 
 0.565
ncoa2
Nuclear receptor coactivator.
    
 0.531
OSBPL8
Oxysterol-binding protein; Belongs to the OSBP family.
   
  
 0.522
LOC105354240
BZIP domain-containing protein; Belongs to the bZIP family.
      
 0.503
LOC101175313
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.499
LOC101174204
Potassium calcium-activated channel subfamily N member 2.
   
  
 0.496
LOC101156116
Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3.
   
  
 0.496
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.