STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpt2Carnitine palmitoyltransferase 2; Belongs to the carnitine/choline acetyltransferase family. (666 aa)    
Predicted Functional Partners:
acadvl
Acyl-CoA dehydrogenase very long chain.
   
 0.966
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.963
Acadm
Acyl-CoA_dh_1 domain-containing protein.
   
 0.959
acadl
Acyl-CoA dehydrogenase long chain.
   
 0.954
LOC101168603
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.927
LOC101161122
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.927
LOC101168027
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.927
LOC101174354
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.927
LOC101160160
Carnitine palmitoyltransferase 1B (muscle); Belongs to the carnitine/choline acetyltransferase family.
  
 
0.925
LOC101172168
Carnitine palmitoyltransferase 1Cb; Belongs to the carnitine/choline acetyltransferase family.
  
 
0.925
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.