STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000045283PH domain-containing protein. (192 aa)    
Predicted Functional Partners:
ENSORLP00000038022
Phorbol-ester/DAG-type domain-containing protein.
 
      0.899
Akap13
ANK_REP_REGION domain-containing protein.
 
      0.599
LOC101155194
Uncharacterized protein.
   
 0.567
RHOB
Ras homolog family member B.
   
 0.567
LOC101173444
Uncharacterized protein.
   
 0.567
LOC101158607
Uncharacterized protein.
   
 0.567
LOC101160539
Uncharacterized protein.
   
 0.567
LOC101167618
Uncharacterized protein.
   
 0.567
RND1
Rho family GTPase 1.
   
 0.494
LOC101168783
Rho family GTPase 1b.
   
 0.494
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.