STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101170982Uncharacterized protein. (369 aa)    
Predicted Functional Partners:
LOC100125525
Uncharacterized protein.
      
 0.674
pxdn
Peroxidasin.
   
  
 0.619
p2ry12
Purinergic receptor P2Y12.
      
 0.618
ptprc
Protein tyrosine phosphatase receptor type C.
   
  
 0.593
LOC101169209
Uncharacterized protein.
   
  
 0.581
tyrobp
Uncharacterized protein.
   
  
 0.581
AIF1
Allograft inflammatory factor 1.
   
 
 0.574
H2LKL8_ORYLA
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.563
LOC100125537
Uncharacterized protein.
   
  
 0.561
il10
Interleukin 10.
      
 0.558
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.