STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agkAcylglycerol kinase. (426 aa)    
Predicted Functional Partners:
lclat1
Lysocardiolipin acyltransferase 1.
  
 
 0.915
mgll
Monoglyceride lipase.
    
 0.915
gpam
Glycerol-3-phosphate acyltransferase 1, mitochondrial.
     
 0.912
agpat3
1-acylglycerol-3-phosphate O-acyltransferase 3.
  
 
 0.911
agpat4
1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta).
  
 
 0.911
LOC101159762
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.911
Timm29
Translocase of inner mitochondrial membrane 29.
    
 
 0.910
LOC101156981
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
     
 0.909
GPAT4
PlsC domain-containing protein.
    
 0.909
gpat3
Glycerol-3-phosphate acyltransferase 3.
    
 0.909
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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