STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcaf10WD repeat domain 32. (507 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.990
dcaf5
Ddb1 and cul4 associated factor 5.
     
 0.883
wdtc1
WD and tetratricopeptide repeats 1.
   
 
 0.867
dcaf4
WD repeat domain 21.
     
 0.863
dcaf6
Ddb1 and cul4 associated factor 6.
     
 0.851
dcaf11
DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family.
   
0.822
LOC101156715
DDB1 and CUL4 associated factor 8.
     
 0.822
ttc37
Tetratricopeptide repeat domain 37.
    
 0.820
dda1
DET1 and DDB1 associated 1.
    
  0.817
skiv2l
SKI2 homolog, superkiller viralicidic activity 2-like.
    
 0.816
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.