STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmpk2Cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial. (418 aa)    
Predicted Functional Partners:
Ak9
Uncharacterized protein.
    
 0.969
dctd
dCMP deaminase.
    
 0.966
LOC101156995
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
 0.959
LOC101156188
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
 0.959
uprt
Uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae).
    
 0.958
umps
Uridine monophosphate synthetase.
  
 
 0.958
LOC101162762
Deoxyguanosine kinase.
  
 
 0.952
LOC101155710
dNK domain-containing protein.
  
 
 0.952
dck
Deoxycytidine kinase.
  
 
 0.952
LOC101175406
NME/NM23 nucleoside diphosphate kinase 4; Belongs to the NDK family.
    
 0.952
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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