STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tpcn2Uncharacterized protein. (788 aa)    
Predicted Functional Partners:
Unc79
Uncharacterized protein.
   
 0.991
tpcn1
Two pore segment channel 1.
    
0.925
LOC101168676
CD38 molecule.
     
 0.900
LOC101168159
Uncharacterized protein.
     
 0.900
LOC101168658-2
Uncharacterized protein.
     
 0.900
LOC100125512
Metalloendopeptidase.
      
 0.790
LOC100125511
Metalloendopeptidase.
      
 0.780
nadsyn1
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
 
 
  
 0.712
wdr35
WD repeat-containing protein 35.
    
 0.654
IFT122
Intraflagellar transport 122.
   
 0.639
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.