STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000045626Histone H2B; Belongs to the histone H2B family. (199 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.898
ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component.
 
 
 0.825
H2L747_ORYLA
Histone H2A; Belongs to the histone H2A family.
 
 0.811
LOC101170450
H2A histone family, member Y; Belongs to the histone H2A family.
   
 0.794
LOC101166735
H2A histone family, member Y2.
   
 0.794
LOC101172846
Histone H2A; Belongs to the histone H2A family.
   
 0.787
LOC101170644
H2A histone family, member Va; Belongs to the histone H2A family.
   
 0.787
ENSORLP00000026346
Histone H2A; Belongs to the histone H2A family.
 
 0.784
ENSORLP00000026871
Histone H2A; Belongs to the histone H2A family.
 
 0.783
LOC101161131
Lysine (K)-specific demethylase 6A, like.
    
 0.782
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.