STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101173701Engulfment and cell motility 3. (742 aa)    
Predicted Functional Partners:
dock4
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
    
 0.991
dock5
Dedicator of cytokinesis 5; Belongs to the DOCK family.
  
 
 0.839
DOCK2
Dedicator of cytokinesis 2; Belongs to the DOCK family.
    
 0.801
dock1
Dedicator of cytokinesis 1; Belongs to the DOCK family.
    
 0.801
LOC101165978
Uncharacterized protein; Belongs to the DOCK family.
    
 0.773
ENSORLP00000042844
DHR-1 domain-containing protein; Belongs to the DOCK family.
    
 0.773
clrn2
Clarin 2.
    
 0.716
CLRN3
Clarin 3.
    
 0.716
H2LP85_ORYLA
Ras homolog gene family, member Gd.
    
 0.693
LOC101162944
Ras homolog family member Gb.
    
 0.693
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.