STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hspb7SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (207 aa)    
Predicted Functional Partners:
dnajc5g
DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a.
   
 0.667
DNAJC5B
DnaJ heat shock protein family (Hsp40) member C5 beta.
   
 0.667
LOC101166705
Uncharacterized protein.
    
 
 0.551
flnc
Uncharacterized protein.
    
 
 0.549
LOC101169506
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.524
hsbp1
Heat shock factor binding protein 1a.
     
 0.515
pbx3
Homeobox domain-containing protein.
      
 0.512
LOC101159440
Pre-B-cell leukemia transcription factor 4.
      
 0.506
dnajc3
DnaJ (Hsp40) homolog, subfamily C, member 3a.
   
 0.485
hspa4l
Heat shock protein 4 like.
    
 0.433
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.