STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101162674Insulin-like growth factor binding protein 3. (283 aa)    
Predicted Functional Partners:
igf1
Insulin-like growth factor 1.
   
 
 0.913
IGFBP3
Insulin like growth factor binding protein 3.
  
  
 
0.902
igf2
Insulin-like growth factor 2b.
   
 0.752
psenen
Presenilin enhancer, gamma-secretase subunit.
      
 0.567
cdk5
Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.
      
 0.507
slc16a3
Solute carrier family 16 member 3.
      
 0.501
ddx46
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.
      
 0.501
coasy
CoA synthase.
      
 0.459
LOC101167502
EH-domain containing 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
      
 0.440
ccdc90b
Coiled-coil domain containing 90B.
      
 0.440
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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