LOC101167873 protein (Oryzias latipes) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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co-expression

protein homology

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Score

LOC101167873

1-acylglycerol-3-phosphate O-acyltransferase 9, like. (444 aa)

Predicted Functional Partners:

gpam

0.952

LOC101156981

0.949

gpd1

0.938

LOC101158855

0.938

LOC101155171

0.938

gpd2

0.923

gk

0.921

LOC101157895

0.911

agk

0.909

GPAT4

0.901

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GPAT4	LOC101155171	ENSORLP00000014473	ENSORLP00000039677	PlsC domain-containing protein.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.938
GPAT4	LOC101156981	ENSORLP00000014473	ENSORLP00000003752	PlsC domain-containing protein.	Glycerol-3-phosphate acyltransferase 2, mitochondrial.	0.953
GPAT4	LOC101157895	ENSORLP00000014473	ENSORLP00000010124	PlsC domain-containing protein.	Uncharacterized protein; Belongs to the FGGY kinase family.	0.911
GPAT4	LOC101158855	ENSORLP00000014473	ENSORLP00000015568	PlsC domain-containing protein.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.938
GPAT4	LOC101167873	ENSORLP00000014473	ENSORLP00000045794	PlsC domain-containing protein.	1-acylglycerol-3-phosphate O-acyltransferase 9, like.	0.901
GPAT4	agk	ENSORLP00000014473	ENSORLP00000045364	PlsC domain-containing protein.	Acylglycerol kinase.	0.909
GPAT4	gk	ENSORLP00000014473	ENSORLP00000004075	PlsC domain-containing protein.	Uncharacterized protein; Belongs to the FGGY kinase family.	0.921
GPAT4	gpam	ENSORLP00000014473	ENSORLP00000026369	PlsC domain-containing protein.	Glycerol-3-phosphate acyltransferase 1, mitochondrial.	0.952
GPAT4	gpd1	ENSORLP00000014473	ENSORLP00000008605	PlsC domain-containing protein.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.938
GPAT4	gpd2	ENSORLP00000014473	ENSORLP00000028581	PlsC domain-containing protein.	Glycerol-3-phosphate dehydrogenase 2 (mitochondrial).	0.923
LOC101155171	GPAT4	ENSORLP00000039677	ENSORLP00000014473	Glycerol-3-phosphate dehydrogenase [NAD(+)].	PlsC domain-containing protein.	0.938
LOC101155171	LOC101156981	ENSORLP00000039677	ENSORLP00000003752	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Glycerol-3-phosphate acyltransferase 2, mitochondrial.	0.952
LOC101155171	LOC101157895	ENSORLP00000039677	ENSORLP00000010124	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Uncharacterized protein; Belongs to the FGGY kinase family.	0.508
LOC101155171	LOC101158855	ENSORLP00000039677	ENSORLP00000015568	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.901
LOC101155171	LOC101167873	ENSORLP00000039677	ENSORLP00000045794	Glycerol-3-phosphate dehydrogenase [NAD(+)].	1-acylglycerol-3-phosphate O-acyltransferase 9, like.	0.938
LOC101155171	gk	ENSORLP00000039677	ENSORLP00000004075	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Uncharacterized protein; Belongs to the FGGY kinase family.	0.481
LOC101155171	gpam	ENSORLP00000039677	ENSORLP00000026369	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Glycerol-3-phosphate acyltransferase 1, mitochondrial.	0.952
LOC101155171	gpd1	ENSORLP00000039677	ENSORLP00000008605	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.901
LOC101155171	gpd2	ENSORLP00000039677	ENSORLP00000028581	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Glycerol-3-phosphate dehydrogenase 2 (mitochondrial).	0.847
LOC101156981	GPAT4	ENSORLP00000003752	ENSORLP00000014473	Glycerol-3-phosphate acyltransferase 2, mitochondrial.	PlsC domain-containing protein.	0.953

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Network Stats

number of nodes:

11

number of edges:

26

average node degree:

4.73

avg. local clustering coefficient:

0.832

expected number of edges:

13

PPI enrichment p-value:

0.00129

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0015940

Pantothenate biosynthetic process

3 of 3

2.73

2.14

0.00012

GO:0044281

Small molecule metabolic process

6 of 561

0.76

0.45

0.0297

GO:0008152

Metabolic process

11 of 2530

0.37

0.28

0.0202

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005622

Intracellular anatomical structure

11 of 1542

0.58

0.51

5.39e-05

GO:0005737

Cytoplasm

10 of 1412

0.58

0.48

0.00036

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:2050

Mixed, incl. Pyridine-containing compound biosynthetic process, and Riboflavin metabolic process

4 of 33

1.81

1.69

0.00027

CL:2047

Mixed, incl. Vitamin biosynthetic process, and Pyridine nucleotide biosynthetic process

5 of 67

1.6

1.64

0.00013

CL:1144

Citrate cycle (TCA cycle), and Aldehyde dehydrogenase family

3 of 12

2.13

1.64

0.00068

CL:2051

Mixed, incl. Riboflavin metabolic process, and Pantothenate biosynthesis

3 of 18

1.95

1.46

0.0013

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00770

Pantothenate and CoA biosynthesis

4 of 23

1.97

2.32

1.34e-05

map00250

Alanine, aspartate and glutamate metabolism

4 of 36

1.77

2.0

3.44e-05

map00410

beta-Alanine metabolism

2 of 2

2.73

1.78

0.00056

map00350

Tyrosine metabolism

2 of 11

1.99

1.16

0.0058

map01100

Metabolic pathways

11 of 1639

0.55

0.49

3.44e-05

(more ...)

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0005737

Cytoplasm

8 of 926

0.66

0.45

0.0121

GOCC:0005622

Intracellular

9 of 1536

0.5

0.33

0.0276

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0566

Pantothenate biosynthesis

3 of 3

2.73

2.55

2.03e-05

KW-0963

Cytoplasm

5 of 274

0.99

0.68

0.0089

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