STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sirt3NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (339 aa)    
Predicted Functional Partners:
nadsyn1
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
    
 0.940
nampt
Nicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family.
     
 0.931
LOC101156645
Nicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family.
     
 0.922
LOC101167825
NAD kinase b.
  
 
 0.921
nadk
NAD kinase a.
  
 
 0.921
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
    
 0.915
LOC101171813
Nicotinamide nucleotide transhydrogenase 2.
   
 
 0.902
LOC101168801
Nicotinamide nucleotide transhydrogenase.
   
 
 0.902
LOC101171013
Uncharacterized protein.
    
  0.900
LOC101155077
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
    
  0.900
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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