STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101173182BCL9 transcription coactivator. (1489 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.786
lef1
Lymphoid enhancer-binding factor 1.
     
 0.755
tcf7
Transcription factor 7.
     
 0.736
LOC101159202
Pygopus homolog 2 (Drosophila).
    
 0.725
tcf7l1
HMG box domain-containing protein.
     
 0.714
LOC111948314
HMG box domain-containing protein.
     
 0.714
tcf7l2
Transcription factor 7 like 2.
     
 0.714
bcl9l
Bcl9 like.
     
0.598
LOC101171502
Uncharacterized protein.
    
 0.594
LOC101173369
Junction plakoglobin a.
    
 0.594
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.